Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 AC139530.3-201ENST00000620344 690 ntBASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 PCDHA1-201ENST00000378133 2726 ntBASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 OR6D1P-203ENST00000641209 4860 ntBASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCC2Q8TAQ2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 AP001350.2-201ENST00000625104 1094 ntBASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SMARCC2Q8TAQ2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SMARCC2Q8TAQ2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCC2Q8TAQ2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCC2Q8TAQ2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCC2Q8TAQ2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 PCGF3-213ENST00000620529 1899 ntBASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCC2Q8TAQ2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCC2Q8TAQ2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms