Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 NME6-203ENST00000415644 849 ntTSL 2 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 MAX-210ENST00000555419 765 ntTSL 5 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 AC092337.1-201ENST00000568699 1129 ntBASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 AC010319.3-201ENST00000597028 470 ntBASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP43Q8NDM7 AC020907.1-201ENST00000616460 1350 ntBASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 CD74-212ENST00000524315 584 ntTSL 5 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AC004461.2-201ENST00000629517 803 ntBASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 AL589702.1-201ENST00000641229 1509 ntBASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC25.49■■□□□ 1.67
CFAP43Q8NDM7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 AC245100.5-201ENST00000452108 331 ntBASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 ACTBP11-201ENST00000436287 1126 ntBASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 EEF1DP4-201ENST00000446006 880 ntBASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 MIR6869-201ENST00000619434 62 ntBASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP43Q8NDM7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 AC098859.1-201ENST00000502915 1238 ntBASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 AC024267.1-201ENST00000582320 895 ntBASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 RNF216P1-203ENST00000404404 2427 ntBASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP43Q8NDM7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms