Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SNHG9-202ENST00000564014 471 ntBASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 RARRES2P8-201ENST00000566335 367 ntBASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDH20Q8N6Y1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 AKAP8P1-201ENST00000434743 1349 ntBASIC16.96■□□□□ 0.3
PCDH20Q8N6Y1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CNN2P11-201ENST00000429351 262 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 RN7SL589P-201ENST00000481268 310 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AL596442.2-201ENST00000610240 980 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AC026120.1-201ENST00000611536 926 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AL513210.1-201ENST00000629608 234 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AC105339.1-204ENST00000636249 355 ntBASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
PCDH20Q8N6Y1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 AL139011.1-202ENST00000642063 584 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms