Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AC092364.2-201ENST00000596710 2692 ntBASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MKNK2P1-201ENST00000437526 628 ntBASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 AL118508.1-201ENST00000613502 2345 ntBASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCUBE3Q8IX30 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 PCGF3-213ENST00000620529 1899 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 WASH6P-202ENST00000359512 1437 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 ME2P1-201ENST00000426028 1970 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CEND1P1-201ENST00000451006 455 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 MIR4469-201ENST00000583919 79 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms