Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 PRELID1P1-202ENST00000567272 903 ntBASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 AC139887.3-201ENST00000568585 713 ntBASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 AL355877.3-201ENST00000622820 899 ntBASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC50Q8IVM0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC50Q8IVM0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 SART3-203ENST00000546611 1184 ntBASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 MTDHP4-201ENST00000600287 670 ntBASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC50Q8IVM0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 AC068587.6-202ENST00000641839 5619 ntBASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 AC091304.2-201ENST00000564639 760 ntBASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC50Q8IVM0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms