Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 AL590787.1-201ENST00000568856 1315 ntBASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 Z69720.1-201ENST00000601483 472 ntBASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 AC144831.1-201ENST00000573312 2656 ntBASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 AL031731.1-201ENST00000642131 2094 ntBASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 BNIP3P18-201ENST00000593976 575 ntBASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NUDCD3Q8IVD9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AC067930.6-201ENST00000623257 4947 ntBASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.53■□□□□ 0.24
NUDCD3Q8IVD9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 AC016734.2-201ENST00000624325 1377 ntBASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms