Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 SLC7A15P-201ENST00000424028 1363 ntBASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS4Q8IUM7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 WASH4P-201ENST00000564273 1246 ntBASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 MIR6069-201ENST00000620069 79 ntBASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 AC007431.3-201ENST00000623221 587 ntBASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NPAS4Q8IUM7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 AL031731.1-201ENST00000642131 2094 ntBASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 MEP1AP4-201ENST00000423244 1087 ntBASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 AL139010.1-201ENST00000454878 894 ntBASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 OR6D1P-202ENST00000641007 5290 ntBASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPAS4Q8IUM7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 AC141586.5-201ENST00000624546 2050 ntBASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPAS4Q8IUM7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms