Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 PMS2P4-201ENST00000412466 1052 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 GPX1P2-201ENST00000429271 606 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 FAM58CP-201ENST00000435741 640 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 ALG1L5P-201ENST00000482043 771 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AC109635.5-201ENST00000533593 962 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 MIR3909-201ENST00000579518 119 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AC010327.4-202ENST00000591484 748 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 GGT4P-201ENST00000623672 1708 ntBASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 AC103702.1-201ENST00000548801 2630 ntBASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 RPSAP43-201ENST00000402237 625 ntBASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 AC021097.1-201ENST00000607902 574 ntBASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
LYSMD3Q7Z3D4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AC002056.1-201ENST00000395613 760 ntBASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AC112482.1-201ENST00000492080 688 ntBASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AC112191.1-201ENST00000523689 701 ntBASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
LYSMD3Q7Z3D4 AC099522.2-201ENST00000607001 744 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms