Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AC015922.1-201ENST00000421102 1152 ntBASIC20.8■□□□□ 0.92
COPS6Q7L5N1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS6Q7L5N1 PCGF3-213ENST00000620529 1899 ntBASIC20.79■□□□□ 0.92
COPS6Q7L5N1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 AC009477.1-201ENST00000452936 217 ntBASIC20.79■□□□□ 0.92
COPS6Q7L5N1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 AC009407.1-201ENST00000568958 598 ntBASIC20.79■□□□□ 0.92
COPS6Q7L5N1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS6Q7L5N1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AC190387.1-201ENST00000551683 408 ntBASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AL079307.3-201ENST00000556114 283 ntBASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AL844908.2-201ENST00000609461 460 ntBASIC20.78■□□□□ 0.92
COPS6Q7L5N1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 AC087499.5-201ENST00000452760 1342 ntBASIC20.78■□□□□ 0.92
COPS6Q7L5N1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.78■□□□□ 0.92
COPS6Q7L5N1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
COPS6Q7L5N1 HLA-A-202ENST00000376806 1854 ntBASIC20.77■□□□□ 0.92
COPS6Q7L5N1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms