Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 MFAP1P1-201ENST00000442257 1255 ntBASIC9.02□□□□□ -0.97
LCA10Q71F78 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 FAM197Y4-202ENST00000622692 608 ntBASIC9.02□□□□□ -0.97
LCA10Q71F78 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
LCA10Q71F78 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 TNN-203ENST00000622870 3719 ntTSL 5 BASIC9.02□□□□□ -0.97
LCA10Q71F78 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.97
LCA10Q71F78 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC9.02□□□□□ -0.97
LCA10Q71F78 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC9.02□□□□□ -0.97
LCA10Q71F78 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 SDHAP2-201ENST00000455183 2001 ntBASIC9.02□□□□□ -0.97
LCA10Q71F78 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.02□□□□□ -0.97
LCA10Q71F78 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LCA10Q71F78 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 AC096733.2-201ENST00000609937 1394 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 UROS-202ENST00000368778 1556 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 MIR149-201ENST00000384879 89 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 MESTP1-201ENST00000404287 994 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 FAM197Y1-201ENST00000421178 764 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 AC060834.1-201ENST00000443027 2032 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 RPPH1-201ENST00000516869 333 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 RNF121-214ENST00000533380 870 ntTSL 3 BASIC9.01□□□□□ -0.97
LCA10Q71F78 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 SLC25A1P4-201ENST00000567977 778 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 MIR3180-5-201ENST00000583743 153 ntBASIC9.01□□□□□ -0.97
LCA10Q71F78 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 GALC-206ENST00000544807 2528 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SP100-208ENST00000427101 1922 ntTSL 2 BASIC9.01□□□□□ -0.97
LCA10Q71F78 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC9.01□□□□□ -0.97
LCA10Q71F78 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
LCA10Q71F78 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LCA10Q71F78 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms