Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 AC005622.1-201ENST00000636801 1703 ntBASIC18.69■□□□□ 0.58
SHC4Q6S5L8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.69■□□□□ 0.58
SHC4Q6S5L8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 IGHV3-22-201ENST00000520721 359 ntBASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 SLC25A6P4-201ENST00000586535 553 ntBASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC4Q6S5L8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 HCG4B-203ENST00000450128 991 ntBASIC18.68■□□□□ 0.58
SHC4Q6S5L8 AL513480.1-201ENST00000451731 511 ntBASIC18.68■□□□□ 0.58
SHC4Q6S5L8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 AL031055.1-201ENST00000606362 631 ntBASIC18.68■□□□□ 0.58
SHC4Q6S5L8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 PKD1P1-201ENST00000458669 6805 ntBASIC18.68■□□□□ 0.58
SHC4Q6S5L8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.68■□□□□ 0.58
SHC4Q6S5L8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC4Q6S5L8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 RNA5SP415-201ENST00000517246 115 ntBASIC18.67■□□□□ 0.58
SHC4Q6S5L8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 KRT126P-201ENST00000549467 1181 ntBASIC18.67■□□□□ 0.58
SHC4Q6S5L8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms