Protein–RNA interactions for Protein: Q5VV63

ATRNL1, Attractin-like protein 1, humanhuman

Predictions only

Length 1,379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRNL1Q5VV63 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 AL365330.1-201ENST00000607459 531 ntBASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 AL008721.1-201ENST00000609964 604 ntBASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 U82695.1-201ENST00000635752 1889 ntBASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATRNL1Q5VV63 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 SDHAP3-202ENST00000515467 728 ntBASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 AC004461.2-201ENST00000629517 803 ntBASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 AC078925.2-201ENST00000624013 1973 ntBASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 HLA-A-202ENST00000376806 1854 ntBASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.2■□□□□ 0.66
ATRNL1Q5VV63 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 GIMAP3P-201ENST00000495150 836 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC055876.2-201ENST00000531834 546 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC007431.3-201ENST00000623221 587 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC005622.1-201ENST00000636801 1703 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 CYP4F24P-201ENST00000586049 1580 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC087499.6-201ENST00000411576 835 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 HIST3H2BA-201ENST00000436555 524 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC092337.1-201ENST00000568699 1129 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AL359881.2-201ENST00000602973 570 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 AC099568.2-201ENST00000609194 695 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 MIR6069-201ENST00000620069 79 ntBASIC19.19■□□□□ 0.66
ATRNL1Q5VV63 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATRNL1Q5VV63 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms