Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 AC096734.2-201ENST00000562054 433 ntBASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 AC027612.4-201ENST00000605371 583 ntBASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 AC010507.1-201ENST00000633895 436 ntBASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 AC092865.6-201ENST00000642101 219 ntBASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERC4Q5GLZ8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 ALOX12P2-203ENST00000570921 1945 ntBASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AL513190.1-201ENST00000621254 727 ntBASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AC093028.1-201ENST00000622998 982 ntBASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC4Q5GLZ8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 HMGA1P7-201ENST00000406908 502 ntBASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 RHOQP3-201ENST00000437982 621 ntBASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 CEND1P1-201ENST00000451006 455 ntBASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 AC138761.1-201ENST00000584393 385 ntBASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC4Q5GLZ8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 PCDHB19P-201ENST00000570871 2371 ntBASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.52■□□□□ 0.55
HERC4Q5GLZ8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms