Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 AL121912.1-201ENST00000603683 238 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 MIR1199-201ENST00000621445 119 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCS1Q01581 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.03■□□□□ 0.16
HMGCS1Q01581 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCS1Q01581 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 AC105339.3-201ENST00000560043 636 ntBASIC16.02■□□□□ 0.16
HMGCS1Q01581 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 AL356488.2-201ENST00000602755 427 ntBASIC16.02■□□□□ 0.16
HMGCS1Q01581 AL121894.2-201ENST00000602977 491 ntBASIC16.02■□□□□ 0.16
HMGCS1Q01581 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.02■□□□□ 0.16
HMGCS1Q01581 AC148477.8-201ENST00000624298 468 ntBASIC16.02■□□□□ 0.16
HMGCS1Q01581 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCS1Q01581 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HMGCS1Q01581 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGCS1Q01581 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 AL596087.1-201ENST00000400979 1969 ntBASIC16.02■□□□□ 0.15
HMGCS1Q01581 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HMGCS1Q01581 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.15
HMGCS1Q01581 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCS1Q01581 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AL139384.1-201ENST00000612143 3047 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AC129492.6-201ENST00000611383 1305 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 GPAA1P2-202ENST00000606848 1787 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AC079781.3-201ENST00000449110 356 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 AC087641.1-201ENST00000557561 1021 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AC005412.3-201ENST00000580309 715 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AL031008.1-201ENST00000619963 541 ntBASIC16.01■□□□□ 0.15
HMGCS1Q01581 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCS1Q01581 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCS1Q01581 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16■□□□□ 0.15
HMGCS1Q01581 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms