Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX4P78413 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX4P78413 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX4P78413 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
IRX4P78413 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.32■□□□□ 0.36
IRX4P78413 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 COX5BP2-201ENST00000392354 334 ntBASIC17.32■□□□□ 0.36
IRX4P78413 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
IRX4P78413 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 AC244107.1-201ENST00000442033 332 ntBASIC17.32■□□□□ 0.36
IRX4P78413 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.32■□□□□ 0.36
IRX4P78413 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 PDPK2P-202ENST00000562415 1191 ntBASIC17.32■□□□□ 0.36
IRX4P78413 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 LINC02012-201ENST00000608206 1725 ntBASIC17.32■□□□□ 0.36
IRX4P78413 AC093525.9-201ENST00000624961 1746 ntBASIC17.32■□□□□ 0.36
IRX4P78413 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
IRX4P78413 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 CICP6-201ENST00000457191 2729 ntBASIC17.32■□□□□ 0.36
IRX4P78413 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IRX4P78413 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
IRX4P78413 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 AC132938.5-201ENST00000624980 1813 ntBASIC17.31■□□□□ 0.36
IRX4P78413 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 BCAR1-209ENST00000546196 1340 ntBASIC17.31■□□□□ 0.36
IRX4P78413 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX4P78413 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.31■□□□□ 0.36
IRX4P78413 AC004449.1-201ENST00000564240 433 ntBASIC17.31■□□□□ 0.36
IRX4P78413 AL096865.1-201ENST00000606796 927 ntBASIC17.31■□□□□ 0.36
IRX4P78413 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.31■□□□□ 0.36
IRX4P78413 AL353593.2-201ENST00000602529 1483 ntBASIC17.31■□□□□ 0.36
IRX4P78413 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
IRX4P78413 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IRX4P78413 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms