Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SEC61A1P61619 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.62□□□□□ -0.07
SEC61A1P61619 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SEC61A1P61619 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SEC61A1P61619 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SEC61A1P61619 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 AL590627.1-203ENST00000421194 1026 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC103564.2-201ENST00000432853 1299 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC109462.3-201ENST00000573934 613 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 MTDHP4-201ENST00000600287 670 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC019129.2-201ENST00000609837 1235 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.61□□□□□ -0.07
SEC61A1P61619 FAM215A-202ENST00000632077 792 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC079776.2-201ENST00000641154 1609 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 AC068587.6-202ENST00000641839 5619 ntBASIC14.61□□□□□ -0.07
SEC61A1P61619 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.61□□□□□ -0.07
SEC61A1P61619 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SEC61A1P61619 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
SEC61A1P61619 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 AC132938.5-201ENST00000624980 1813 ntBASIC14.6□□□□□ -0.07
SEC61A1P61619 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.6□□□□□ -0.07
SEC61A1P61619 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 IL9RP2-201ENST00000423948 1312 ntBASIC14.6□□□□□ -0.07
SEC61A1P61619 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.6□□□□□ -0.07
SEC61A1P61619 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SEC61A1P61619 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.6□□□□□ -0.07
SEC61A1P61619 AC126177.1-201ENST00000547829 2218 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms