Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CASP6P55212 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.92□□□□□ -0.02
CASP6P55212 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP6P55212 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.92□□□□□ -0.02
CASP6P55212 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.92□□□□□ -0.02
CASP6P55212 MPDU1-223ENST00000582151 728 ntBASIC14.92□□□□□ -0.02
CASP6P55212 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CASP6P55212 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.92□□□□□ -0.02
CASP6P55212 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP6P55212 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP6P55212 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP6P55212 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CASP6P55212 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP6P55212 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 GNAS-203ENST00000306120 1878 ntBASIC14.91□□□□□ -0.02
CASP6P55212 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP6P55212 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.91□□□□□ -0.02
CASP6P55212 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP6P55212 CRB3P1-201ENST00000449338 276 ntBASIC14.91□□□□□ -0.02
CASP6P55212 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.91□□□□□ -0.02
CASP6P55212 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.91□□□□□ -0.02
CASP6P55212 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.91□□□□□ -0.02
CASP6P55212 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CASP6P55212 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CASP6P55212 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CASP6P55212 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP6P55212 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP6P55212 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP6P55212 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP6P55212 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 AC018695.7-201ENST00000624587 2492 ntBASIC14.9□□□□□ -0.02
CASP6P55212 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CASP6P55212 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CASP6P55212 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.9□□□□□ -0.02
CASP6P55212 AL353705.2-201ENST00000428243 662 ntBASIC14.9□□□□□ -0.02
CASP6P55212 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CASP6P55212 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.9□□□□□ -0.02
CASP6P55212 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.9□□□□□ -0.02
CASP6P55212 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CASP6P55212 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms