Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC9A3P48764 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC9A3P48764 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 NKAPP1-205ENST00000585790 367 ntBASIC15.29■□□□□ 0.04
SLC9A3P48764 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC9A3P48764 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC9A3P48764 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC9A3P48764 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC9A3P48764 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 TOP3BP1-201ENST00000420768 1380 ntBASIC15.28■□□□□ 0.04
SLC9A3P48764 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 FOSL1P1-201ENST00000511041 816 ntBASIC15.28■□□□□ 0.04
SLC9A3P48764 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 AC064862.7-201ENST00000604520 867 ntBASIC15.28■□□□□ 0.04
SLC9A3P48764 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC9A3P48764 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC9A3P48764 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC9A3P48764 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC9A3P48764 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms