Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF4P48230 CLUHP6-201ENST00000580789 941 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.6■□□□□ 0.57
TM4SF4P48230 AC244669.2-201ENST00000612320 853 ntBASIC18.6■□□□□ 0.57
TM4SF4P48230 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF4P48230 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
TM4SF4P48230 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TM4SF4P48230 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF4P48230 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF4P48230 AC012441.1-201ENST00000446669 685 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF4P48230 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF4P48230 AC016629.1-201ENST00000596579 586 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF4P48230 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TM4SF4P48230 AC015967.2-201ENST00000624092 234 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 AC006435.4-201ENST00000625037 234 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 AL356737.1-201ENST00000634391 234 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF4P48230 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TM4SF4P48230 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF4P48230 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF4P48230 AL607033.1-201ENST00000623900 1599 ntBASIC18.59■□□□□ 0.57
TM4SF4P48230 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF4P48230 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.58■□□□□ 0.57
TM4SF4P48230 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TM4SF4P48230 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF4P48230 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.58■□□□□ 0.57
TM4SF4P48230 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF4P48230 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF4P48230 AC134312.5-201ENST00000568031 1313 ntBASIC18.58■□□□□ 0.57
TM4SF4P48230 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TM4SF4P48230 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
TM4SF4P48230 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.58■□□□□ 0.56
TM4SF4P48230 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TM4SF4P48230 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
TM4SF4P48230 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.58■□□□□ 0.56
TM4SF4P48230 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.58■□□□□ 0.56
TM4SF4P48230 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.58■□□□□ 0.56
TM4SF4P48230 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF4P48230 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.58■□□□□ 0.56
TM4SF4P48230 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.58■□□□□ 0.56
TM4SF4P48230 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF4P48230 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.58■□□□□ 0.56
TM4SF4P48230 AL138688.1-201ENST00000624851 1594 ntBASIC18.58■□□□□ 0.56
TM4SF4P48230 AC104581.1-202ENST00000635932 2618 ntBASIC18.58■□□□□ 0.56
TM4SF4P48230 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.58■□□□□ 0.56
TM4SF4P48230 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF4P48230 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF4P48230 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TM4SF4P48230 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF4P48230 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.57■□□□□ 0.56
TM4SF4P48230 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.57■□□□□ 0.56
TM4SF4P48230 AKR7A2P1-201ENST00000460134 915 ntBASIC18.57■□□□□ 0.56
TM4SF4P48230 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.57■□□□□ 0.56
TM4SF4P48230 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF4P48230 KRT90P-201ENST00000549264 1064 ntBASIC18.57■□□□□ 0.56
TM4SF4P48230 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms