Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC1A3P43003 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC1A3P43003 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 PRSS29P-201ENST00000440800 595 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 SLC25A6P4-201ENST00000586535 553 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 AC004790.2-201ENST00000623588 572 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 AC116407.3-201ENST00000623905 1129 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A3P43003 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A3P43003 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A3P43003 AC105917.1-201ENST00000506637 2539 ntBASIC15.3■□□□□ 0.04
SLC1A3P43003 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.29■□□□□ 0.04
SLC1A3P43003 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A3P43003 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A3P43003 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC1A3P43003 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 AC098831.1-202ENST00000438821 336 ntBASIC15.29■□□□□ 0.04
SLC1A3P43003 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A3P43003 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A3P43003 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC1A3P43003 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC1A3P43003 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 AC010654.1-201ENST00000615722 808 ntBASIC15.29■□□□□ 0.04
SLC1A3P43003 AP001350.2-201ENST00000625104 1094 ntBASIC15.29■□□□□ 0.04
SLC1A3P43003 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A3P43003 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A3P43003 ALOX12P2-203ENST00000570921 1945 ntBASIC15.29■□□□□ 0.04
SLC1A3P43003 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A3P43003 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A3P43003 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
SLC1A3P43003 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A3P43003 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A3P43003 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms