Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 AC005104.2-201ENST00000427818 678 ntBASIC18.92■□□□□ 0.62
CLCN1P35523 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.92■□□□□ 0.62
CLCN1P35523 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 AC005336.2-201ENST00000593183 939 ntBASIC18.92■□□□□ 0.62
CLCN1P35523 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCN1P35523 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCN1P35523 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCN1P35523 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN1P35523 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 AC015656.1-201ENST00000624209 3578 ntBASIC18.91■□□□□ 0.62
CLCN1P35523 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.91■□□□□ 0.62
CLCN1P35523 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 PCED1CP-201ENST00000419887 785 ntBASIC18.91■□□□□ 0.62
CLCN1P35523 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN1P35523 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLCN1P35523 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.91■□□□□ 0.62
CLCN1P35523 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
CLCN1P35523 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CLCN1P35523 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN1P35523 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLCN1P35523 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN1P35523 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLCN1P35523 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.9■□□□□ 0.62
CLCN1P35523 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.9■□□□□ 0.62
CLCN1P35523 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms