Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.75□□□□□ -0.05
HOXC12P31275 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.75□□□□□ -0.05
HOXC12P31275 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HOXC12P31275 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.75□□□□□ -0.05
HOXC12P31275 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HOXC12P31275 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HOXC12P31275 AC092053.1-201ENST00000605787 1936 ntBASIC14.74□□□□□ -0.05
HOXC12P31275 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.74□□□□□ -0.05
HOXC12P31275 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.74□□□□□ -0.05
HOXC12P31275 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 AC002056.1-201ENST00000395613 760 ntBASIC14.74□□□□□ -0.05
HOXC12P31275 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.74□□□□□ -0.05
HOXC12P31275 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.74□□□□□ -0.05
HOXC12P31275 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
HOXC12P31275 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 AC190387.1-201ENST00000551683 408 ntBASIC14.74□□□□□ -0.05
HOXC12P31275 MIR4745-201ENST00000577608 62 ntBASIC14.74□□□□□ -0.05
HOXC12P31275 MPDU1-223ENST00000582151 728 ntBASIC14.74□□□□□ -0.05
HOXC12P31275 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.74□□□□□ -0.05
HOXC12P31275 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.74□□□□□ -0.05
HOXC12P31275 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HOXC12P31275 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HOXC12P31275 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HOXC12P31275 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HOXC12P31275 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HOXC12P31275 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HOXC12P31275 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.73□□□□□ -0.05
HOXC12P31275 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms