Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.25■□□□□ 0.03
SHC1P29353 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.25■□□□□ 0.03
SHC1P29353 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHC1P29353 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHC1P29353 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SHC1P29353 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 PMS2P1-201ENST00000431037 1228 ntBASIC15.24■□□□□ 0.03
SHC1P29353 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 KRT18P3-201ENST00000451602 1288 ntBASIC15.24■□□□□ 0.03
SHC1P29353 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 CXCL1P1-201ENST00000502804 216 ntBASIC15.24■□□□□ 0.03
SHC1P29353 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.24■□□□□ 0.03
SHC1P29353 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.24■□□□□ 0.03
SHC1P29353 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.24■□□□□ 0.03
SHC1P29353 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 KRT8P49-201ENST00000604166 1432 ntBASIC15.24■□□□□ 0.03
SHC1P29353 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SHC1P29353 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHC1P29353 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 AC092364.2-201ENST00000596710 2692 ntBASIC15.23■□□□□ 0.03
SHC1P29353 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 AC129492.6-201ENST00000611383 1305 ntBASIC15.23■□□□□ 0.03
SHC1P29353 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 SLC22A20-204ENST00000530038 1673 ntBASIC15.23■□□□□ 0.03
SHC1P29353 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 FAM185BP-201ENST00000443595 716 ntBASIC15.23■□□□□ 0.03
SHC1P29353 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 KRT18P58-201ENST00000527480 1120 ntBASIC15.23■□□□□ 0.03
SHC1P29353 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.23■□□□□ 0.03
SHC1P29353 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms