Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.03■□□□□ -0
GDF1P27539 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.03■□□□□ -0
GDF1P27539 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GDF1P27539 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.03■□□□□ -0
GDF1P27539 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
GDF1P27539 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
GDF1P27539 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.03■□□□□ -0
GDF1P27539 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GDF1P27539 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.03■□□□□ -0
GDF1P27539 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.03■□□□□ -0
GDF1P27539 RFPL4AP1-201ENST00000530883 850 ntBASIC15.03■□□□□ -0
GDF1P27539 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.03■□□□□ -0
GDF1P27539 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.03■□□□□ -0
GDF1P27539 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GDF1P27539 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.03■□□□□ -0
GDF1P27539 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.03■□□□□ -0
GDF1P27539 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.03■□□□□ -0
GDF1P27539 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GDF1P27539 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.03■□□□□ -0
GDF1P27539 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 AL603756.1-201ENST00000606511 2163 ntBASIC15.02■□□□□ -0
GDF1P27539 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.02■□□□□ -0
GDF1P27539 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GDF1P27539 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
GDF1P27539 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
GDF1P27539 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GDF1P27539 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
GDF1P27539 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
GDF1P27539 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
GDF1P27539 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.02■□□□□ -0
GDF1P27539 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.02■□□□□ -0
GDF1P27539 FAM86GP-201ENST00000448322 971 ntBASIC15.02■□□□□ -0
GDF1P27539 PRYP6-201ENST00000514804 343 ntBASIC15.02■□□□□ -0
GDF1P27539 AC105233.2-201ENST00000523697 349 ntBASIC15.02■□□□□ -0
GDF1P27539 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.02■□□□□ -0
GDF1P27539 AF228730.5-201ENST00000530288 346 ntBASIC15.02■□□□□ -0
GDF1P27539 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GDF1P27539 SLC25A39P2-201ENST00000537614 270 ntBASIC15.02■□□□□ -0
GDF1P27539 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.02■□□□□ -0
GDF1P27539 LINC01225-203ENST00000563550 1244 ntBASIC15.02■□□□□ -0
GDF1P27539 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GDF1P27539 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
GDF1P27539 AL138918.1-201ENST00000568306 659 ntBASIC15.02■□□□□ -0
GDF1P27539 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.02■□□□□ -0
GDF1P27539 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.02□□□□□ -0.01
GDF1P27539 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
GDF1P27539 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GDF1P27539 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.02□□□□□ -0.01
GDF1P27539 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GDF1P27539 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.01□□□□□ -0.01
GDF1P27539 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.01□□□□□ -0.01
GDF1P27539 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.01□□□□□ -0.01
GDF1P27539 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.01□□□□□ -0.01
GDF1P27539 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GDF1P27539 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms