Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
MSR1P21757 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.69□□□□□ -0.06
MSR1P21757 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.69□□□□□ -0.06
MSR1P21757 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 GGT4P-201ENST00000623672 1708 ntBASIC14.69□□□□□ -0.06
MSR1P21757 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MSR1P21757 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.68□□□□□ -0.06
MSR1P21757 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MSR1P21757 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
MSR1P21757 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MSR1P21757 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 AL513480.1-201ENST00000451731 511 ntBASIC14.68□□□□□ -0.06
MSR1P21757 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.68□□□□□ -0.06
MSR1P21757 AC079776.4-201ENST00000511039 504 ntBASIC14.68□□□□□ -0.06
MSR1P21757 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.68□□□□□ -0.06
MSR1P21757 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.68□□□□□ -0.06
MSR1P21757 Z83851.2-201ENST00000609564 659 ntBASIC14.68□□□□□ -0.06
MSR1P21757 AL645728.2-201ENST00000641974 660 ntBASIC14.68□□□□□ -0.06
MSR1P21757 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
MSR1P21757 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.68□□□□□ -0.06
MSR1P21757 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.68□□□□□ -0.06
MSR1P21757 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MSR1P21757 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 AC006449.5-201ENST00000610658 2098 ntBASIC14.67□□□□□ -0.06
MSR1P21757 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MSR1P21757 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.67□□□□□ -0.06
MSR1P21757 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.67□□□□□ -0.06
MSR1P21757 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.67□□□□□ -0.06
MSR1P21757 AL365209.1-201ENST00000624418 6473 ntBASIC14.67□□□□□ -0.06
MSR1P21757 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.67□□□□□ -0.06
MSR1P21757 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.67□□□□□ -0.06
MSR1P21757 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 GPAA1P2-202ENST00000606848 1787 ntBASIC14.67□□□□□ -0.06
MSR1P21757 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.67□□□□□ -0.06
MSR1P21757 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms