Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ATF1P18846 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 AC010331.1-201ENST00000611423 582 ntBASIC14.62□□□□□ -0.07
ATF1P18846 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.62□□□□□ -0.07
ATF1P18846 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ATF1P18846 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.61□□□□□ -0.07
ATF1P18846 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.61□□□□□ -0.07
ATF1P18846 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.61□□□□□ -0.07
ATF1P18846 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 AP005117.1-202ENST00000581724 1908 ntBASIC14.61□□□□□ -0.07
ATF1P18846 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.61□□□□□ -0.07
ATF1P18846 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ATF1P18846 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.61□□□□□ -0.07
ATF1P18846 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.61□□□□□ -0.07
ATF1P18846 ATP5G2P1-201ENST00000433580 426 ntBASIC14.61□□□□□ -0.07
ATF1P18846 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.61□□□□□ -0.07
ATF1P18846 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.61□□□□□ -0.07
ATF1P18846 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.61□□□□□ -0.07
ATF1P18846 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.61□□□□□ -0.07
ATF1P18846 AC092119.3-201ENST00000612618 583 ntBASIC14.61□□□□□ -0.07
ATF1P18846 AL358472.4-201ENST00000633140 710 ntBASIC14.61□□□□□ -0.07
ATF1P18846 AL139011.1-202ENST00000642063 584 ntBASIC14.61□□□□□ -0.07
ATF1P18846 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.61□□□□□ -0.07
ATF1P18846 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.61□□□□□ -0.07
ATF1P18846 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 AC013268.4-201ENST00000637413 2228 ntBASIC14.61□□□□□ -0.07
ATF1P18846 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATF1P18846 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.61□□□□□ -0.07
ATF1P18846 AC022532.1-201ENST00000624563 1728 ntBASIC14.61□□□□□ -0.07
ATF1P18846 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 AC006277.1-201ENST00000624348 1610 ntBASIC14.6□□□□□ -0.07
ATF1P18846 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 KRT16P4-201ENST00000453883 522 ntBASIC14.6□□□□□ -0.07
ATF1P18846 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.6□□□□□ -0.07
ATF1P18846 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 AC013467.2-201ENST00000605472 835 ntBASIC14.6□□□□□ -0.07
ATF1P18846 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms