Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A2P13942 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A2P13942 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A2P13942 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A2P13942 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A2P13942 AL603756.1-201ENST00000606511 2163 ntBASIC19.91■□□□□ 0.78
COL11A2P13942 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A2P13942 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A2P13942 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.9■□□□□ 0.78
COL11A2P13942 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 AP002490.2-201ENST00000524791 560 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A2P13942 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 BTNL10-201ENST00000595971 695 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 AL365330.1-201ENST00000607459 531 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A2P13942 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL11A2P13942 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A2P13942 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A2P13942 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 BRWD1P1-201ENST00000401091 371 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 AC074338.1-201ENST00000416825 156 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 RPL13P2-201ENST00000440687 659 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
COL11A2P13942 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL11A2P13942 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A2P13942 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A2P13942 KRT90P-201ENST00000549264 1064 ntBASIC19.9■□□□□ 0.78
COL11A2P13942 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A2P13942 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A2P13942 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A2P13942 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A2P13942 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A2P13942 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
COL11A2P13942 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A2P13942 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A2P13942 KRT8P22-201ENST00000562317 1415 ntBASIC19.89■□□□□ 0.78
COL11A2P13942 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.89■□□□□ 0.77
COL11A2P13942 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 SLC25A47P1-201ENST00000531577 414 ntBASIC19.89■□□□□ 0.77
COL11A2P13942 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A2P13942 C2orf69P2-201ENST00000562032 1123 ntBASIC19.89■□□□□ 0.77
COL11A2P13942 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.89■□□□□ 0.77
COL11A2P13942 AL022328.1-201ENST00000610050 478 ntBASIC19.89■□□□□ 0.77
COL11A2P13942 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A2P13942 AL139099.5-201ENST00000635274 300 ntBASIC19.89■□□□□ 0.77
COL11A2P13942 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A2P13942 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
COL11A2P13942 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A2P13942 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A2P13942 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A2P13942 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A2P13942 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A2P13942 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL11A2P13942 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms