Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
BMP4P12644 AC132008.2-207ENST00000454517 770 ntBASIC15.3■□□□□ 0.04
BMP4P12644 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.3■□□□□ 0.04
BMP4P12644 AC091607.1-201ENST00000490318 1060 ntBASIC15.3■□□□□ 0.04
BMP4P12644 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.3■□□□□ 0.04
BMP4P12644 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BMP4P12644 AC079776.4-201ENST00000511039 504 ntBASIC15.3■□□□□ 0.04
BMP4P12644 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BMP4P12644 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BMP4P12644 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.3■□□□□ 0.04
BMP4P12644 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
BMP4P12644 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.3■□□□□ 0.04
BMP4P12644 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
BMP4P12644 AC022532.1-201ENST00000624563 1728 ntBASIC15.3■□□□□ 0.04
BMP4P12644 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
BMP4P12644 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BMP4P12644 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.29■□□□□ 0.04
BMP4P12644 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BMP4P12644 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 FAM197Y8-203ENST00000450145 560 ntBASIC15.29■□□□□ 0.04
BMP4P12644 AC009078.2-202ENST00000463353 338 ntBASIC15.29■□□□□ 0.04
BMP4P12644 AC073648.2-201ENST00000510116 352 ntBASIC15.29■□□□□ 0.04
BMP4P12644 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
BMP4P12644 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 AC008608.2-201ENST00000606089 416 ntBASIC15.29■□□□□ 0.04
BMP4P12644 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 AL773604.1-201ENST00000617417 272 ntBASIC15.29■□□□□ 0.04
BMP4P12644 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BMP4P12644 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BMP4P12644 CICP13-201ENST00000422015 2789 ntBASIC15.29■□□□□ 0.04
BMP4P12644 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.29■□□□□ 0.04
BMP4P12644 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BMP4P12644 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BMP4P12644 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.28■□□□□ 0.04
BMP4P12644 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 RCN1P2-201ENST00000398357 915 ntBASIC15.28■□□□□ 0.04
BMP4P12644 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.28■□□□□ 0.04
BMP4P12644 AC112698.1-201ENST00000510299 916 ntBASIC15.28■□□□□ 0.04
BMP4P12644 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.28■□□□□ 0.04
BMP4P12644 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.28■□□□□ 0.04
BMP4P12644 AP001005.1-201ENST00000571755 1248 ntBASIC15.28■□□□□ 0.04
BMP4P12644 AL138831.2-201ENST00000606564 490 ntBASIC15.28■□□□□ 0.04
BMP4P12644 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
BMP4P12644 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BMP4P12644 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms