Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 FAM210CP-201ENST00000445714 574 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 PAWRP1-201ENST00000451083 565 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.62□□□□□ -0.07
UBCP0CG48 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.62□□□□□ -0.07
UBCP0CG48 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.62□□□□□ -0.07
UBCP0CG48 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.62□□□□□ -0.07
UBCP0CG48 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.62□□□□□ -0.07
UBCP0CG48 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.62□□□□□ -0.07
UBCP0CG48 AC091167.2-201ENST00000579581 588 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 AC064862.7-201ENST00000604520 867 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 AC091076.1-201ENST00000610741 619 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.62□□□□□ -0.07
UBCP0CG48 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.62□□□□□ -0.07
UBCP0CG48 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 AC104640.1-201ENST00000562617 2109 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
UBCP0CG48 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
UBCP0CG48 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
UBCP0CG48 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.61□□□□□ -0.07
UBCP0CG48 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.61□□□□□ -0.07
UBCP0CG48 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UBCP0CG48 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UBCP0CG48 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.61□□□□□ -0.07
UBCP0CG48 MPDU1-223ENST00000582151 728 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 NKAPP1-205ENST00000585790 367 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.61□□□□□ -0.07
UBCP0CG48 AL358472.4-201ENST00000633140 710 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 AF228730.7-201ENST00000641842 219 ntBASIC14.61□□□□□ -0.07
UBCP0CG48 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
UBCP0CG48 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.61□□□□□ -0.07
UBCP0CG48 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBCP0CG48 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.61□□□□□ -0.07
UBCP0CG48 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
UBCP0CG48 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.6□□□□□ -0.07
UBCP0CG48 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
UBCP0CG48 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.6□□□□□ -0.07
UBCP0CG48 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.6□□□□□ -0.07
UBCP0CG48 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.6□□□□□ -0.07
UBCP0CG48 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.6□□□□□ -0.07
UBCP0CG48 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
UBCP0CG48 AC139887.3-201ENST00000568585 713 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms