Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.58■□□□□ 0.56
HOXC6P09630 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.58■□□□□ 0.56
HOXC6P09630 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HOXC6P09630 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC6P09630 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.58■□□□□ 0.56
HOXC6P09630 AC026979.3-201ENST00000607315 403 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 MIR6805-201ENST00000615055 62 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.58■□□□□ 0.56
HOXC6P09630 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC6P09630 AL589702.1-201ENST00000641229 1509 ntBASIC18.58■□□□□ 0.56
HOXC6P09630 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HOXC6P09630 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC6P09630 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC6P09630 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC6P09630 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HOXC6P09630 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXC6P09630 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.57■□□□□ 0.56
HOXC6P09630 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
HOXC6P09630 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.57■□□□□ 0.56
HOXC6P09630 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXC6P09630 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 AC112492.5-201ENST00000421897 457 ntBASIC18.57■□□□□ 0.56
HOXC6P09630 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXC6P09630 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HOXC6P09630 KRT17P8-201ENST00000540749 863 ntBASIC18.57■□□□□ 0.56
HOXC6P09630 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXC6P09630 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXC6P09630 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HOXC6P09630 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC6P09630 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
HOXC6P09630 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC6P09630 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HOXC6P09630 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HOXC6P09630 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HOXC6P09630 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC6P09630 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXC6P09630 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC6P09630 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXC6P09630 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 AP002490.2-201ENST00000524791 560 ntBASIC18.56■□□□□ 0.56
HOXC6P09630 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.56■□□□□ 0.56
HOXC6P09630 AC004461.2-201ENST00000629517 803 ntBASIC18.56■□□□□ 0.56
HOXC6P09630 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC6P09630 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 AC092053.1-201ENST00000605787 1936 ntBASIC18.56■□□□□ 0.56
HOXC6P09630 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HOXC6P09630 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXC6P09630 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXC6P09630 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC6P09630 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms