Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC008667.4-201ENST00000607370 168 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CAPN1P07384 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CAPN1P07384 ALOX12P2-203ENST00000570921 1945 ntBASIC16.39■□□□□ 0.21
CAPN1P07384 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN1P07384 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.38■□□□□ 0.21
CAPN1P07384 AC023274.1-201ENST00000418278 595 ntBASIC16.38■□□□□ 0.21
CAPN1P07384 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CAPN1P07384 AC112482.1-201ENST00000492080 688 ntBASIC16.38■□□□□ 0.21
CAPN1P07384 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.38■□□□□ 0.21
CAPN1P07384 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.38■□□□□ 0.21
CAPN1P07384 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 AC010327.4-202ENST00000591484 748 ntBASIC16.38■□□□□ 0.21
CAPN1P07384 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.38■□□□□ 0.21
CAPN1P07384 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.38■□□□□ 0.21
CAPN1P07384 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.38■□□□□ 0.21
CAPN1P07384 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CAPN1P07384 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
CAPN1P07384 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CAPN1P07384 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CAPN1P07384 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN1P07384 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN1P07384 AL596257.1-201ENST00000641463 2694 ntBASIC16.37■□□□□ 0.21
CAPN1P07384 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN1P07384 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CAPN1P07384 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.37■□□□□ 0.21
CAPN1P07384 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN1P07384 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.37■□□□□ 0.21
CAPN1P07384 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CAPN1P07384 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CAPN1P07384 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms