Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
COL5A2P05997 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.45■■□□□ 1.02
COL5A2P05997 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL5A2P05997 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.45■■□□□ 1.02
COL5A2P05997 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
COL5A2P05997 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.45■■□□□ 1.02
COL5A2P05997 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.45■■□□□ 1.02
COL5A2P05997 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL5A2P05997 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.44■■□□□ 1.02
COL5A2P05997 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL5A2P05997 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL5A2P05997 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL5A2P05997 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.44■■□□□ 1.02
COL5A2P05997 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.44■■□□□ 1.02
COL5A2P05997 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 AZGP1P1-201ENST00000411909 902 ntBASIC21.44■■□□□ 1.02
COL5A2P05997 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.44■■□□□ 1.02
COL5A2P05997 AC068587.3-201ENST00000526613 355 ntBASIC21.44■■□□□ 1.02
COL5A2P05997 TDH-203ENST00000531764 1110 ntBASIC21.44■■□□□ 1.02
COL5A2P05997 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.44■■□□□ 1.02
COL5A2P05997 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.44■■□□□ 1.02
COL5A2P05997 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL5A2P05997 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL5A2P05997 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL5A2P05997 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL5A2P05997 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL5A2P05997 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
COL5A2P05997 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.43■■□□□ 1.02
COL5A2P05997 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.43■■□□□ 1.02
COL5A2P05997 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
COL5A2P05997 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.43■■□□□ 1.02
COL5A2P05997 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 HAUS4P1-201ENST00000406739 1145 ntBASIC21.43■■□□□ 1.02
COL5A2P05997 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.43■■□□□ 1.02
COL5A2P05997 AC074338.1-201ENST00000416825 156 ntBASIC21.43■■□□□ 1.02
COL5A2P05997 RPL7P3-201ENST00000441388 714 ntBASIC21.43■■□□□ 1.02
COL5A2P05997 ZNF767P-206ENST00000513792 565 ntBASIC21.43■■□□□ 1.02
COL5A2P05997 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.43■■□□□ 1.02
COL5A2P05997 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.43■■□□□ 1.02
COL5A2P05997 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.43■■□□□ 1.02
COL5A2P05997 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL5A2P05997 U82695.1-201ENST00000635752 1889 ntBASIC21.43■■□□□ 1.02
COL5A2P05997 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.42■■□□□ 1.02
COL5A2P05997 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.42■■□□□ 1.02
COL5A2P05997 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.42■■□□□ 1.02
COL5A2P05997 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL5A2P05997 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.42■■□□□ 1.02
COL5A2P05997 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.42■■□□□ 1.02
COL5A2P05997 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.42■■□□□ 1.02
COL5A2P05997 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.42■■□□□ 1.02
COL5A2P05997 AL359711.2-201ENST00000563105 872 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms