Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.1■□□□□ 0.49
VTNP04004 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.1■□□□□ 0.49
VTNP04004 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VTNP04004 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.1■□□□□ 0.49
VTNP04004 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 AC100757.3-201ENST00000622361 1406 ntBASIC18.1■□□□□ 0.49
VTNP04004 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.1■□□□□ 0.49
VTNP04004 AC241585.1-201ENST00000433527 519 ntBASIC18.1■□□□□ 0.49
VTNP04004 AC002472.2-201ENST00000442739 958 ntBASIC18.1■□□□□ 0.49
VTNP04004 AC093724.1-201ENST00000448659 1027 ntBASIC18.1■□□□□ 0.49
VTNP04004 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
VTNP04004 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VTNP04004 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.1■□□□□ 0.49
VTNP04004 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.1■□□□□ 0.49
VTNP04004 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 AC020765.3-201ENST00000613051 740 ntBASIC18.1■□□□□ 0.49
VTNP04004 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VTNP04004 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VTNP04004 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.09■□□□□ 0.49
VTNP04004 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.09■□□□□ 0.49
VTNP04004 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 AC006538.1-201ENST00000567905 1585 ntBASIC18.09■□□□□ 0.49
VTNP04004 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VTNP04004 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 AL353705.2-201ENST00000428243 662 ntBASIC18.09■□□□□ 0.49
VTNP04004 MTND6P24-201ENST00000440466 518 ntBASIC18.09■□□□□ 0.49
VTNP04004 COX20P2-201ENST00000452636 358 ntBASIC18.09■□□□□ 0.49
VTNP04004 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.09■□□□□ 0.49
VTNP04004 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
VTNP04004 AL590560.3-201ENST00000623350 461 ntBASIC18.09■□□□□ 0.49
VTNP04004 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VTNP04004 UBALD1-205ENST00000590891 2641 ntBASIC18.09■□□□□ 0.49
VTNP04004 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VTNP04004 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VTNP04004 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.09■□□□□ 0.49
VTNP04004 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VTNP04004 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.08■□□□□ 0.49
VTNP04004 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
VTNP04004 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
VTNP04004 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 AC078925.2-201ENST00000624013 1973 ntBASIC18.08■□□□□ 0.49
VTNP04004 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VTNP04004 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.08■□□□□ 0.48
VTNP04004 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 AC004890.2-204ENST00000481968 304 ntBASIC18.08■□□□□ 0.48
VTNP04004 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.08■□□□□ 0.48
VTNP04004 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.08■□□□□ 0.48
VTNP04004 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 BANF1P1-201ENST00000553684 263 ntBASIC18.08■□□□□ 0.48
VTNP04004 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VTNP04004 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.08■□□□□ 0.48
VTNP04004 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.08■□□□□ 0.48
VTNP04004 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTNP04004 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.07■□□□□ 0.48
VTNP04004 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.07■□□□□ 0.48
VTNP04004 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTNP04004 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms