Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-CO1P00395 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MT-CO1P00395 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.02■□□□□ 0.32
MT-CO1P00395 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.02■□□□□ 0.32
MT-CO1P00395 AC013467.2-201ENST00000605472 835 ntBASIC17.02■□□□□ 0.32
MT-CO1P00395 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.02■□□□□ 0.32
MT-CO1P00395 AL513210.1-201ENST00000629608 234 ntBASIC17.02■□□□□ 0.32
MT-CO1P00395 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MT-CO1P00395 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-CO1P00395 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MT-CO1P00395 LINC00895-201ENST00000629028 1637 ntBASIC17.02■□□□□ 0.31
MT-CO1P00395 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-CO1P00395 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-CO1P00395 FER1L4-210ENST00000615531 5998 ntBASIC17.02■□□□□ 0.31
MT-CO1P00395 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-CO1P00395 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MT-CO1P00395 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.02■□□□□ 0.31
MT-CO1P00395 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.02■□□□□ 0.31
MT-CO1P00395 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.02■□□□□ 0.31
MT-CO1P00395 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
MT-CO1P00395 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-CO1P00395 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MT-CO1P00395 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 RNF216P1-203ENST00000404404 2427 ntBASIC17.01■□□□□ 0.31
MT-CO1P00395 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-CO1P00395 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-CO1P00395 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-CO1P00395 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 FLJ38576-201ENST00000623820 2459 ntBASIC17.01■□□□□ 0.31
MT-CO1P00395 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
MT-CO1P00395 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 AC004461.1-201ENST00000412461 403 ntBASIC17.01■□□□□ 0.31
MT-CO1P00395 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
MT-CO1P00395 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MT-CO1P00395 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MT-CO1P00395 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.01■□□□□ 0.31
MT-CO1P00395 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
MT-CO1P00395 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-CO1P00395 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-CO1P00395 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-CO1P00395 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-CO1P00395 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 PMS2P4-201ENST00000412466 1052 ntBASIC17■□□□□ 0.31
MT-CO1P00395 TFAMP1-201ENST00000412727 736 ntBASIC17■□□□□ 0.31
MT-CO1P00395 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 TIMM8BP1-201ENST00000452384 211 ntBASIC17■□□□□ 0.31
MT-CO1P00395 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17■□□□□ 0.31
MT-CO1P00395 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17■□□□□ 0.31
MT-CO1P00395 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 AC022145.2-201ENST00000598203 171 ntBASIC17■□□□□ 0.31
MT-CO1P00395 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17■□□□□ 0.31
MT-CO1P00395 PCDHB19P-201ENST00000570871 2371 ntBASIC17■□□□□ 0.31
MT-CO1P00395 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MT-CO1P00395 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17■□□□□ 0.31
MT-CO1P00395 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-CO1P00395 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms