Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.06■□□□□ 0.64
MBD3O95983 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MBD3O95983 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD3O95983 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
MBD3O95983 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.06■□□□□ 0.64
MBD3O95983 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.06■□□□□ 0.64
MBD3O95983 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.06■□□□□ 0.64
MBD3O95983 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.06■□□□□ 0.64
MBD3O95983 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.06■□□□□ 0.64
MBD3O95983 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.06■□□□□ 0.64
MBD3O95983 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.06■□□□□ 0.64
MBD3O95983 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MBD3O95983 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MBD3O95983 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
MBD3O95983 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.06■□□□□ 0.64
MBD3O95983 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.05■□□□□ 0.64
MBD3O95983 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.05■□□□□ 0.64
MBD3O95983 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD3O95983 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 KRT8P26-201ENST00000534154 1276 ntBASIC19.05■□□□□ 0.64
MBD3O95983 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD3O95983 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD3O95983 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 AP005901.3-202ENST00000581653 237 ntBASIC19.05■□□□□ 0.64
MBD3O95983 MPDU1-223ENST00000582151 728 ntBASIC19.05■□□□□ 0.64
MBD3O95983 AC011498.5-201ENST00000592027 486 ntBASIC19.05■□□□□ 0.64
MBD3O95983 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.05■□□□□ 0.64
MBD3O95983 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 AC010654.1-201ENST00000615722 808 ntBASIC19.05■□□□□ 0.64
MBD3O95983 AC005363.2-201ENST00000618631 242 ntBASIC19.05■□□□□ 0.64
MBD3O95983 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.05■□□□□ 0.64
MBD3O95983 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.05■□□□□ 0.64
MBD3O95983 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MBD3O95983 AC063926.3-201ENST00000624734 5658 ntBASIC19.05■□□□□ 0.64
MBD3O95983 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
MBD3O95983 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 FAM45BP-202ENST00000592932 1624 ntBASIC19.04■□□□□ 0.64
MBD3O95983 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.04■□□□□ 0.64
MBD3O95983 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.04■□□□□ 0.64
MBD3O95983 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.04■□□□□ 0.64
MBD3O95983 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.04■□□□□ 0.64
MBD3O95983 TMEM191A-211ENST00000637163 1067 ntBASIC19.04■□□□□ 0.64
MBD3O95983 PKD1P5-201ENST00000532415 10291 ntBASIC19.04■□□□□ 0.64
MBD3O95983 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.04■□□□□ 0.64
MBD3O95983 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms