Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 ZNF259P1-201ENST00000407656 1365 ntBASIC19.16■□□□□ 0.66
CTDNEP1O95476 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 AC132872.4-202ENST00000622924 2756 ntBASIC19.15■□□□□ 0.66
CTDNEP1O95476 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 AC093724.1-201ENST00000448659 1027 ntBASIC19.15■□□□□ 0.66
CTDNEP1O95476 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 AL078644.1-201ENST00000609881 752 ntBASIC19.15■□□□□ 0.66
CTDNEP1O95476 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTDNEP1O95476 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.15■□□□□ 0.66
CTDNEP1O95476 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.14■□□□□ 0.66
CTDNEP1O95476 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.14■□□□□ 0.66
CTDNEP1O95476 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 KRT18P3-201ENST00000451602 1288 ntBASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC074386.1-202ENST00000463561 864 ntBASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC099522.2-201ENST00000607001 744 ntBASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC027601.4-201ENST00000611259 610 ntBASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDNEP1O95476 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CTDNEP1O95476 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 MED15P5-201ENST00000423150 992 ntBASIC19.13■□□□□ 0.65
CTDNEP1O95476 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.13■□□□□ 0.65
CTDNEP1O95476 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 FAM197Y3-203ENST00000618346 717 ntBASIC19.13■□□□□ 0.65
CTDNEP1O95476 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.13■□□□□ 0.65
CTDNEP1O95476 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDNEP1O95476 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms