Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
UPK1BO75841 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 MIR648-201ENST00000385046 94 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.48□□□□□ -0.09
UPK1BO75841 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.48□□□□□ -0.09
UPK1BO75841 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 AP003041.3-201ENST00000527151 707 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.48□□□□□ -0.09
UPK1BO75841 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.48□□□□□ -0.09
UPK1BO75841 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 DGCR10-201ENST00000609839 495 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 AC010327.5-201ENST00000586923 3061 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
UPK1BO75841 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 AC091951.1-201ENST00000512854 2465 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.48□□□□□ -0.09
UPK1BO75841 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 AC010460.3-201ENST00000511359 1579 ntBASIC14.47□□□□□ -0.09
UPK1BO75841 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
UPK1BO75841 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1BO75841 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 AC083906.2-201ENST00000511578 360 ntBASIC14.47□□□□□ -0.09
UPK1BO75841 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.47□□□□□ -0.09
UPK1BO75841 AC013467.2-201ENST00000605472 835 ntBASIC14.47□□□□□ -0.09
UPK1BO75841 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 AC117489.1-201ENST00000625169 3217 ntBASIC14.47□□□□□ -0.09
UPK1BO75841 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
UPK1BO75841 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.47□□□□□ -0.09
UPK1BO75841 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UPK1BO75841 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 KRT89P-201ENST00000620027 1478 ntBASIC14.46□□□□□ -0.09
UPK1BO75841 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 AC006277.1-201ENST00000624348 1610 ntBASIC14.46□□□□□ -0.09
UPK1BO75841 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms