Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 PCDHA1-201ENST00000378133 2726 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDH7O60245 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 AC098831.1-202ENST00000438821 336 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH7O60245 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 AL513523.2-202ENST00000427283 2040 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 PCGF3-213ENST00000620529 1899 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 MTHFR-217ENST00000641820 1569 ntBASIC15.87■□□□□ 0.13
PCDH7O60245 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH7O60245 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 MRPL3P1-201ENST00000400109 1033 ntBASIC15.87■□□□□ 0.13
PCDH7O60245 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH7O60245 AC093909.1-201ENST00000504731 1122 ntBASIC15.87■□□□□ 0.13
PCDH7O60245 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 ACTL9-202ENST00000612068 1252 ntBASIC15.87■□□□□ 0.13
PCDH7O60245 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH7O60245 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH7O60245 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH7O60245 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PCDH7O60245 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDH7O60245 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH7O60245 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH7O60245 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDH7O60245 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH7O60245 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH7O60245 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH7O60245 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms