Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 AC087163.2-201ENST00000457299 853 ntBASIC15.16■□□□□ 0.02
RNF13O43567 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF13O43567 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 AL121912.1-201ENST00000603683 238 ntBASIC15.16■□□□□ 0.02
RNF13O43567 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 AL365203.3-201ENST00000609742 2057 ntBASIC15.16■□□□□ 0.02
RNF13O43567 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF13O43567 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 HYMAI-201ENST00000635591 3347 ntBASIC15.15■□□□□ 0.02
RNF13O43567 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 AC006277.1-201ENST00000624348 1610 ntBASIC15.15■□□□□ 0.02
RNF13O43567 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 DUSP5P1-201ENST00000441325 1139 ntBASIC15.15■□□□□ 0.02
RNF13O43567 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF13O43567 AF186996.4-201ENST00000467186 377 ntBASIC15.15■□□□□ 0.02
RNF13O43567 AC136632.2-201ENST00000512891 861 ntBASIC15.15■□□□□ 0.02
RNF13O43567 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF13O43567 MIR1199-201ENST00000621445 119 ntBASIC15.15■□□□□ 0.02
RNF13O43567 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF13O43567 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF13O43567 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF13O43567 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF13O43567 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 AC024909.3-201ENST00000611513 2257 ntBASIC15.14■□□□□ 0.01
RNF13O43567 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 AC002310.6-201ENST00000624451 1377 ntBASIC15.14■□□□□ 0.01
RNF13O43567 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF13O43567 RPS2P28-201ENST00000314255 741 ntBASIC15.14■□□□□ 0.01
RNF13O43567 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms