Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN5O00501 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN5O00501 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLDN5O00501 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN5O00501 AC142381.1-201ENST00000426099 345 ntBASIC17.46■□□□□ 0.39
CLDN5O00501 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.46■□□□□ 0.39
CLDN5O00501 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN5O00501 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN5O00501 AC084121.4-201ENST00000641598 221 ntBASIC17.46■□□□□ 0.39
CLDN5O00501 AF228730.8-201ENST00000642140 221 ntBASIC17.46■□□□□ 0.39
CLDN5O00501 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 ALOX12P2-203ENST00000570921 1945 ntBASIC17.46■□□□□ 0.39
CLDN5O00501 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.46■□□□□ 0.39
CLDN5O00501 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN5O00501 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN5O00501 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN5O00501 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN5O00501 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN5O00501 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN5O00501 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.45■□□□□ 0.38
CLDN5O00501 AC027796.2-201ENST00000575326 344 ntBASIC17.45■□□□□ 0.38
CLDN5O00501 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
CLDN5O00501 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 AC073389.1-201ENST00000595595 795 ntBASIC17.45■□□□□ 0.38
CLDN5O00501 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.45■□□□□ 0.38
CLDN5O00501 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 PCGF3-213ENST00000620529 1899 ntBASIC17.45■□□□□ 0.38
CLDN5O00501 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN5O00501 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN5O00501 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN5O00501 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN5O00501 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN5O00501 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN5O00501 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN5O00501 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN5O00501 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN5O00501 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN5O00501 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLDN5O00501 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN5O00501 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.44■□□□□ 0.38
CLDN5O00501 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN5O00501 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN5O00501 AC105233.2-201ENST00000523697 349 ntBASIC17.44■□□□□ 0.38
CLDN5O00501 AF228730.5-201ENST00000530288 346 ntBASIC17.44■□□□□ 0.38
CLDN5O00501 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
CLDN5O00501 AC020765.3-201ENST00000613051 740 ntBASIC17.44■□□□□ 0.38
CLDN5O00501 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN5O00501 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN5O00501 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms