Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 AP000593.1-201ENST00000393668 712 ntBASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 GCK-205ENST00000437084 1385 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CICP23-201ENST00000605013 2741 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 IRS3P-201ENST00000223076 1006 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC099791.1-201ENST00000416440 715 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 SRR-208ENST00000576848 588 ntTSL 4 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AL512631.2-201ENST00000604634 923 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC023157.3-201ENST00000619086 2088 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC041040.2-201ENST00000622926 2899 ntBASIC9.18□□□□□ -0.94
CHKB-CPT1BH3BT56 AC092437.1-201ENST00000624794 1048 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms