Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 SPDYE22P-201ENST00000582158 798 ntBASIC19.15■□□□□ 0.66
USP17L11C9JVI0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 AL662799.1-202ENST00000614205 422 ntBASIC19.15■□□□□ 0.66
USP17L11C9JVI0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 RNF216P1-203ENST00000404404 2427 ntBASIC19.15■□□□□ 0.66
USP17L11C9JVI0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 KRT8P39-201ENST00000396270 1433 ntBASIC19.15■□□□□ 0.66
USP17L11C9JVI0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP17L11C9JVI0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP17L11C9JVI0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 RN7SL828P-201ENST00000607615 303 ntBASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC004233.3-201ENST00000607794 1269 ntBASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC025048.6-201ENST00000634326 1161 ntBASIC19.14■□□□□ 0.65
USP17L11C9JVI0 CETN4P-206ENST00000642099 2168 ntBASIC19.14■□□□□ 0.65
USP17L11C9JVI0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP17L11C9JVI0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 MTND6P24-201ENST00000440466 518 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 SPTLC1P1-201ENST00000447199 261 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AC009477.1-201ENST00000452936 217 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AL589739.1-201ENST00000607720 493 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 TEX28P1-201ENST00000613479 1221 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 TEX28P2-201ENST00000617764 1221 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AC087499.5-201ENST00000452760 1342 ntBASIC19.13■□□□□ 0.65
USP17L11C9JVI0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms