Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
LINC00473A8K010 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 AC073648.2-201ENST00000510116 352 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00473A8K010 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00473A8K010 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
LINC00473A8K010 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 CLEC4GP1-201ENST00000596555 870 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 AP001350.2-201ENST00000625104 1094 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00473A8K010 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 LINC01144-201ENST00000626198 1710 ntBASIC13.53□□□□□ -0.24
LINC00473A8K010 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00473A8K010 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00473A8K010 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00473A8K010 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00473A8K010 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00473A8K010 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00473A8K010 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LINC00473A8K010 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00473A8K010 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00473A8K010 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 HCG4-201ENST00000418983 998 ntBASIC13.52□□□□□ -0.25
LINC00473A8K010 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00473A8K010 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00473A8K010 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00473A8K010 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 AC008667.4-201ENST00000607370 168 ntBASIC13.52□□□□□ -0.25
LINC00473A8K010 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
LINC00473A8K010 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00473A8K010 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00473A8K010 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms