Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 AC010947.1-201ENST00000623454 693 ntBASIC11.7□□□□□ -0.54
LINC01546A6NGU7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01546A6NGU7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 CICP4-201ENST00000447359 2812 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AC104581.4-201ENST00000623126 3052 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SPDYE15P-201ENST00000424157 909 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 RN7SL606P-201ENST00000472779 293 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AC009533.2-201ENST00000543664 586 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 Z99916.2-201ENST00000604037 246 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AGAP7P-201ENST00000582299 2062 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 AGAP14-201ENST00000624701 2060 ntBASIC11.69□□□□□ -0.54
LINC01546A6NGU7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01546A6NGU7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms