Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PLEKHD1A6NEE1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 GGT4P-201ENST00000623672 1708 ntBASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 MFF-223ENST00000524634 647 ntTSL 2 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 FAM8A2P-201ENST00000528813 1142 ntBASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 MIR4538-201ENST00000581377 78 ntBASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PLEKHD1A6NEE1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 AL136982.4-201ENST00000437689 1740 ntBASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PLEKHD1A6NEE1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 KRT43P-201ENST00000434019 910 ntBASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 ACTBP11-201ENST00000436287 1126 ntBASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 CYP4F24P-201ENST00000586049 1580 ntBASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 AL391069.4-201ENST00000609583 481 ntBASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC25.16■■□□□ 1.62
PLEKHD1A6NEE1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 RN7SL399P-201ENST00000471648 279 ntBASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 AC233724.13-201ENST00000598383 410 ntBASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PLEKHD1A6NEE1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms