Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPDC1A2A3K4 AL031731.1-201ENST00000642131 2094 ntBASIC19.52■□□□□ 0.71
PTPDC1A2A3K4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPDC1A2A3K4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 KRT8P39-201ENST00000396270 1433 ntBASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 GGT4P-201ENST00000623672 1708 ntBASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 METTL21AP1-201ENST00000438852 635 ntBASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 CYP2T1P-202ENST00000641596 2535 ntBASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 KRT18P28-201ENST00000453838 1332 ntBASIC19.51■□□□□ 0.71
PTPDC1A2A3K4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 ACTG1P14-201ENST00000446382 1122 ntBASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC005412.3-201ENST00000580309 715 ntBASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 AC092902.6-201ENST00000641783 218 ntBASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPDC1A2A3K4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 AC027796.2-201ENST00000575326 344 ntBASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 AP002472.1-201ENST00000577490 586 ntBASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms