Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 KRT18P27-201ENST00000427733 1299 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AC093909.1-201ENST00000504731 1122 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 KRT126P-201ENST00000549467 1181 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AL773604.1-201ENST00000617417 272 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AL031008.1-201ENST00000619963 541 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 AC006277.1-201ENST00000624348 1610 ntBASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRGV1A0A0A0MS02 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 AP002414.3-201ENST00000589352 1468 ntBASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 HNRNPDP1-201ENST00000439535 754 ntBASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 AC018712.1-201ENST00000455767 687 ntBASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 AC092910.1-201ENST00000482027 1129 ntBASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRGV1A0A0A0MS02 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms