Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 GGT4P-201ENST00000623672 1708 ntBASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AC099398.1-201ENST00000567919 2776 ntBASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AC099522.2-201ENST00000607001 744 ntBASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AL161645.1-201ENST00000622716 1255 ntBASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AC092902.6-201ENST00000641783 218 ntBASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAI2Q9Y5P3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 PCDHA14-201ENST00000506751 2298 ntBASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 BCRP1-201ENST00000444246 691 ntBASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 AC093028.1-201ENST00000622998 982 ntBASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAI2Q9Y5P3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms