Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.24■□□□□ 0.35
YIPF1Q9Y548 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
YIPF1Q9Y548 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
YIPF1Q9Y548 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YIPF1Q9Y548 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YIPF1Q9Y548 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AC006538.1-201ENST00000567905 1585 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL589702.1-201ENST00000641229 1509 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL080243.2-201ENST00000418783 582 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AC009477.1-201ENST00000452936 217 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 HLA-J-202ENST00000469281 1241 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL844908.2-201ENST00000609461 460 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PCDHB18P-201ENST00000524813 2368 ntBASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
YIPF1Q9Y548 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 AC005915.1-201ENST00000624912 2018 ntBASIC17.22■□□□□ 0.35
YIPF1Q9Y548 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.22■□□□□ 0.35
YIPF1Q9Y548 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 AL079307.3-201ENST00000556114 283 ntBASIC17.22■□□□□ 0.35
YIPF1Q9Y548 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 AP001094.4-201ENST00000579008 2176 ntBASIC17.22■□□□□ 0.35
YIPF1Q9Y548 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
YIPF1Q9Y548 AC087499.5-201ENST00000452760 1342 ntBASIC17.21■□□□□ 0.35
YIPF1Q9Y548 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.21■□□□□ 0.35
YIPF1Q9Y548 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms