Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 HLA-J-202ENST00000469281 1241 ntBASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 AC126755.1-201ENST00000525846 6405 ntBASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RHBDD3Q9Y3P4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 DUSP5P1-201ENST00000441325 1139 ntBASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 EMBP1-201ENST00000458200 901 ntBASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TSPY26P-202ENST00000565928 3884 ntBASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 NORAD-201ENST00000565493 5339 ntBASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 AC006538.1-201ENST00000567905 1585 ntBASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.59□□□□□ -0.07
RHBDD3Q9Y3P4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RHBDD3Q9Y3P4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RHBDD3Q9Y3P4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RHBDD3Q9Y3P4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RHBDD3Q9Y3P4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.58□□□□□ -0.07
RHBDD3Q9Y3P4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PTCHD3P3-201ENST00000403073 906 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 LAGE3P1-201ENST00000425356 484 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms